Browse of TCMCG013C30603 protein

CDS

Accession Number	TCMCG013C30603
gbkey	CDS
Protein Id	XP_006488934.1
Location	join(1486398..1486421,1488136..1488209,1488336..1488475,1488656..1488739,1488940..1489027,1489108..1489188,1490204..1490281,1490410..1490492,1490929..1491007,1491122..1491433,1491555..1491614,1492260..1492506,1493077..1493328,1494235..1495602,1496712..1496967,1497048..1497189,1498185..1498272,1498389..1498467,1499062..1499357,1499885..1500968,1501329..1501703,1502404..1503014)
Gene	LOC102621056
GeneID	102621056
Organism	Citrus sinensis

Protein

Length	1966aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA225998
db_source	XM_006488871.3
Definition	mediator of RNA polymerase II transcription subunit 13 [Citrus sinensis]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACCAATGTGTTTAGAATTGGAGGTCTTCATCATGTGTCGTGGTTCCAGTTTCTCCCCAACGAATCCGATCTGAATGCTTTGCCTGATAAAAGTGTAAAAGTGGACCAGAAAGATGCTGCTACATTTCTGGTACTTTCTTCTCATCTGCAATTGCAAAAGGAGGGATTTCTTAGCACATGGACAAATTCCTTTGTTGGACCTTGGGATCCATCGCAAGGTTTGCACAATCCTGATGAGAAAATAAAGCTCTGGCTTTTTCTTCCGGGGCGTCATTCATCTGTTGAGACCGCTCAAGCTGCTGTATCTAGATTAAGAGTTGTTGCTTCTGGACTTTGGGTTGCTCCTGGGGACTCAGAAGAGGTAGCGGCTGCCCTCTCTCAGGCTTTGAGGAACTGCATAGAAAGAGCATTGAATGGACTTTCCTACTTGAGATTTGGTGACGTATTTTCGAAGTATCAGCCATCCCAAAGCGAAGAATCTTTCAGGAAAGGACATCCGACAATTGAGTTCATCTTTGCTGCTACTGAAGAGGCAATTTTTATCCATGCTCTAGTATCTGCAAAGCATATCCATTCACTTTCAGGAGGTGACATGGAAAAAGGCTTTAAGCATTCTTCAAGTAGTAGTTCCAGCTTAAGACTTCCAGTGATTGTTTCTCCTCATGGTATGCGTGGTAGGCTCACTGGATATTGTCCCACCGACCTTGTCAAGCAAGTGTATTTTAGGACTTCAAATGGATGTGTAGGTCTACCACATGTTTCTCAAGGATCTGGTTGCCAGCTAAATGGGCAAAATTGCTATGTTGAAGTTACCATGGGTTGTCCTAGGTCTGGAAGTGACAAGGCATCGCATATAAACTCAAACTCCTTAAGAAATTTACACAAGCATAACGTTTCAGAGTCTCCATCAGTAGGAGGAGGTGATCCAAAGGGATCGCCAGATAACATGTCGGCATATGAAAAGACGTTTATTTATCCAGCTGAGGCAGTGCTTGTCCCGGTCTTGCAAACATCATTCTCCAGATCTTCTTTGAGAAGATTTTGGCTTCAAAATTGGATAGGACCATCAATGGCTGGTTCATCTTTCCTCATGCATTGTTTTGGTAATATGGACTCTCTGGAAGGATCTTGGATTGAAACCAATGGCATACATGCTCAACGTGGTTATAACAGTAGTAGCAATAGTAATAATAGCAGCATCAGCTCCATAAGTGGCAGCTCCAGCGATAGTGACTACCAGATGAACGCAAGAACTGGTGACCTTGAAGCAGACGCAGATTCTTTAACATGTAGACAGTCTGGTTTATCTTCCAATGATCAGCTGGAAAATGAAGGCCCCAAATTGGGTTCTAAGCGTCCTCGAACAGGGATGATCGAATCATTTGGTCAAATGGGCACTGGTACAAATGCTTCTACAGATTTTGGCTCTGTGGAGAACACTTCAGCCATTACTGGAGTTGCCAATGACCAGATTGGACCTCATTGGGACTGGGATGATGATGATGACAGAGGCATGGGTATGGATATCCAAGCTCTTCTCTCGGAGTTTGGAGATTTTGGTGACTTCTTTGAAAATGAAAATTTGCCTTTTGGGGAGCCCCCAGGAACTGCAGAGTCTCAGTCCTTCATGTTTTCTGCTCCCGATTGTGGAGATGTGGGTAGCAGTCCCGTTGTAGCCATGGATGTTTCTGATCAAATGCTTATGCCTAATTTTTCGTCATTTGAGAGCTTCAATCCACTGCCAACCATGGCCGTAGAGGAGTGCATGGGCAAAAGTCAAGAAGTCACAAACAATACTCTGACATCAGGTCAAGCGAACCAAAGTCAAGCATCGTCAACTGGTGAGTTTGATCATTTAATGAAAGCTGAAGCCCTGATGACATTTGCTCCAGAATATGGAGCAGTTGAAACTCCTACAAGTGAGTTATCCTCGTCGATTTTCAGAAGTCCATATCTGCCAAAGTCTTACAGAGTGGAGAGTTCAAATTCAAGCTCAAATAATTATGTATATGGTGCAACCCCTCCTGGTTCTCCATGCTTTGATGGATCGGATGAGAAGAATGGCACGCCTGTCTCAAAAGCTTGTTCTGGAAAGCATGACTCAAGTGCTTTGCTTCACTCAAAGAAATATTATTCTCATGTGGAGAGCTCTAAAGAGCAAAATGATAGGAAATCAGTAACACATAAAGATAGCAATGCTAAAAGTGATGGGCTAGTGCTATCCCCGTTCTCTAATTTGAGTTCTACAAATGCTATCAAATCTTTACCAAGGAAGATGACTGAGGGCACATTGGGAGTGGAACATATTTTTTTATCTAAGAAGACTGTGCTTGCGACTGAAGTTGAATGTCTTATGTTCCAAGCTTCCATGTGCAGGATACGTCATGTACTCCTATATTCCAGTAATCCCTCACCTATTAGCTTGAGTAGGTTCACTGGCAGCACGGTCTTGAATCAGCTGCCTGGTGACTTGAGTTCCATGACGGAAAGCACATCTGGAAGATATGAGCTCAAGAAGAAAGAATCTATTCCAGTAAGGATAGCTGGTGATTTTGATGGAGGACTACTAGACGGACACCTGAATGCACCTGTTGGGGTGTGGCGTTCGGTTGGAGTTGCTAAAGTTTCAAAACCTACTAATTCATCAAGTATTGAAGTTAGCCCATCTATGCCCCATGGTTCATTTACTGAGGAAGGTATGATTTCTTACGGGCAAAGGCAACCACTTCAGGAGCTTCTTGATGGTCTGCCATTGCTTGTCCAGCAAGCTACCTCCTTTGTTGATGTGGCATTGGATGCGGATTGTGGTGATGGTCCTTATGGTTGGCTAGCATTACAAGAACATTGGCGGCAAGAATTTTCTTGTGGGCCTTCCATGGTCCATGCAGGTTGTGGAGGGACTCTGGCTTCTTGTCATTCGCTGGACATTGCTGGTGTGGAGTTAGTAGATCCACTTTCCGCTGATATTCATGCTTCCTCGGTTATAAGTTTGCTGCAATCTGAAATTAGAACAGCTCTAAAATCTGCATTTGGAAGTCTGGATGGTCCATTGTCTGTCACAGATTGGTGCAAAGGCCGTGGTCAATCAGTTGATGCAGCGGCCTTAGGGGATGGATCTACTGAGTCTATTAGTGAATGCAGAGATTCTTCAAGTACCATTACTGTTGGAGAAGCACTGAGCCCATCCCAATCTTCTGGCGGTGGATCATCTTCCCTTAAAGTTGCTATGGATGGAACTAAACTCGATGAGACAGGCCAAAGGAGATTGAACCAAGATATTGGCAGTTCAGAGTCAGATCATCAATTGTGTGCCCGTTTGAAGCCAACACTTTTTGTCCTTCCTTCACCTGCTATACTTGTTGGGTACCAGGATGATTGGCTTAAGACATCAGCAACCTCTTTACAGTTTTGGGAAAAGGCCCCTCTTGAACCATATGCTTTACCAAAACCTATCACTTATAATGTTATATGTCCAGACATTGATCCTCTTACTTCTGCTGCGGCTGATTTTTTTCAACAACTAGGAGCTGTTTATGAGACATGCAAACTGGGAACTCATTCACCTCAGAATTTGGGAAACCAAATGGAGATAGATTCTGGGAAATCGCCATCTTCTGGTTTTGTTCTACTGGATTGCCCTCAATCAATGAAAATTGAAAGCAATAACGCATCTCTTGTGGGATCCATAAGCGATTATTTTCTATCTCTGTCCAATGGCTGGGACTTGACAAGCTATCTAAAGTCTCTCTCTAAGGCTCTCAAAACCATGAAACTTGGTCCATGCTCATCTACACAGCAAAAAGAAGGAAACAGTGGTCCTTGTACAGTGATCTATGTGGTGTGCCCCTTCCCAGAGCCTCTTGCAATTCTACAAACTGTTATTGAATCCTCTGCTTCTCTTGGATCTGTTGCTATTTCATCAGATAGAGAGAGAGCTCTATTGCATAGTCAGGTTGGCAAGGCATTAAGCTGCCCAGCAGCAGTGGATGAAACCTCAATATCAAATGTTCTAGCCATTTCTGGGTTTAGTATTCCCAAGTTGGTATTGCAAATTTTGACTGTTGATGAAATTTTTAGGGTTACAAGTCCGGCCATTAATGAACTTGTCCTTCTCAAGGAGACTGCATTTACTGTATACAACAAGGCTCGACGGATTTCCCGAGGGTCTTCTGGTGATGTAGTGCACTCATCTTCACTGTCTAGCAGATCTCATTCAGTCATGAATCAAATGGCATCTATTCCTGGGATGTGGAAGGACTGTGTTGGTTCTCGAATGACCGGACCTTCCCTTAGTAGAGAGGGTGAAATTGATGCTAGCTTGAGGCCTGGCACTTGGGATAATTCCTGGCAAGCAACAAGATCTGGAGGATTAAATTGTGATCCAAACAGAAATGGAGATTTTCTTATTCAAGACGAAATTCGTTTCATGTTTGAACCACTCTTTGTCCTTGCTGAACCTGGCTCTTTAGATCATGGTGTTTCATCTACATTTAATGGCAACTCGACTTCTGATGATAGTACTGGAGGCTTCATGATGAGTGGAAGTACAGCAGGAAGTGCAGATACTGGATCAAGCTCTCAACTGGATAGATCTGAGCAGGATGGCTTTGGATCTGGTCATCACAAGAGTGTTCCAAGTCTGCATTGCTGCTATGGATGGACAGAGGATTGGCGTTGGCTGGTGTGCATCTGGACTGATGCAAGGGGAGAATTGCTCGACAGCCATATATTTCCTTTTGGTGGAATCAGTAGTCGACAGGACACAAAGGGTTTGCAATGCCTTTTCGTGCAAATTTTGCAGCAGGGCTGCCAGATACTTCAGACATGTTGTTCTCCTGATTCTGGTGTTGCCAAGCCTAGGGATTTCGTGATTACACGCATTGGAAGTTTCTATGAGCTTGAATACTTGGAGTGGCAGAAAGCCATTTATTCAGTTGGCGGGTCCGAGATGAAGCAGTGGCCGCTACAACTGCGTCGATCTGTACCTGATGGGATGCCATCAAGTACTAATGGTGCATCCTTGCAGCAGCAGCAGGAGATAAGTTTGATTCAAGAGAGAGCACTACCGTCCTCACCTAGTCCATTGTACAGCCCTCACTCAAAAGCTTCTGGTTTTATGAAAGGTGGTCTAGGACAGCCTGTTGGAAGAAAGCAGCTTATTGGTGGACATACGATGGTTGACAATTCTAGGGGATTGCTTCAGTGGGTACAGAGCATCAGCTTTGTAGCAATTTCAATTGATCATTCTCTGCATCTAGTCCATCAAGCAGATTCACCATCTTCTGGAGGAACCCAGGGTGGCAATGGTGTTGGTCCGTCAGGCTATTTGGAAGGATTCACCCCTGTAAAGTCTCTTGGTGCTACACCTGCATCTTATATTTTGATCCCGTCACCAAGCATGCGCTTCCTTCCTCCAGCACCTCTTCAGCTCCCTACTTGCCTTACTGCTGAATCTCCACCCCTTGCTCATCTCCTTCATAGCAAGGGCTCTGCAATCCCCCTCTCCACTGGATTTGTGGTTTCAAAATCTGTTCCATCTATGAGAAAAGACCACAAAAACAAGTTGAAAGATGAATGGCCTTCTGTACTTTCTGTAAATTTAATTGATTATTATGGAGGTAATAATATTAGCCAAGATAAAGTCACTAGAGTAATTATCAAGCAGGGAGGAAGGACCGCAAGCTCAGAACCTAAAGACTTTGAAGTTGAAACCCATTTGATTCTCGAGTCTATTGCATCAGAACTTCATGCCCTGTCATGGATGACAGCAAGCCCTGCGTACTTGAATCGTCGGACTGCGCTTCCTTTTCACTGTGATATGGTATTAAGACTGAGAAGGTTGCTTCATTTTGCTGACAGAGAGCTCTCTCAGCAGGCAGATAATCCACAATCCTAA

Protein:   MWTNVFRIGGLHHVSWFQFLPNESDLNALPDKSVKVDQKDAATFLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVETAQAAVSRLRVVASGLWVAPGDSEEVAAALSQALRNCIERALNGLSYLRFGDVFSKYQPSQSEESFRKGHPTIEFIFAATEEAIFIHALVSAKHIHSLSGGDMEKGFKHSSSSSSSLRLPVIVSPHGMRGRLTGYCPTDLVKQVYFRTSNGCVGLPHVSQGSGCQLNGQNCYVEVTMGCPRSGSDKASHINSNSLRNLHKHNVSESPSVGGGDPKGSPDNMSAYEKTFIYPAEAVLVPVLQTSFSRSSLRRFWLQNWIGPSMAGSSFLMHCFGNMDSLEGSWIETNGIHAQRGYNSSSNSNNSSISSISGSSSDSDYQMNARTGDLEADADSLTCRQSGLSSNDQLENEGPKLGSKRPRTGMIESFGQMGTGTNASTDFGSVENTSAITGVANDQIGPHWDWDDDDDRGMGMDIQALLSEFGDFGDFFENENLPFGEPPGTAESQSFMFSAPDCGDVGSSPVVAMDVSDQMLMPNFSSFESFNPLPTMAVEECMGKSQEVTNNTLTSGQANQSQASSTGEFDHLMKAEALMTFAPEYGAVETPTSELSSSIFRSPYLPKSYRVESSNSSSNNYVYGATPPGSPCFDGSDEKNGTPVSKACSGKHDSSALLHSKKYYSHVESSKEQNDRKSVTHKDSNAKSDGLVLSPFSNLSSTNAIKSLPRKMTEGTLGVEHIFLSKKTVLATEVECLMFQASMCRIRHVLLYSSNPSPISLSRFTGSTVLNQLPGDLSSMTESTSGRYELKKKESIPVRIAGDFDGGLLDGHLNAPVGVWRSVGVAKVSKPTNSSSIEVSPSMPHGSFTEEGMISYGQRQPLQELLDGLPLLVQQATSFVDVALDADCGDGPYGWLALQEHWRQEFSCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSADIHASSVISLLQSEIRTALKSAFGSLDGPLSVTDWCKGRGQSVDAAALGDGSTESISECRDSSSTITVGEALSPSQSSGGGSSSLKVAMDGTKLDETGQRRLNQDIGSSESDHQLCARLKPTLFVLPSPAILVGYQDDWLKTSATSLQFWEKAPLEPYALPKPITYNVICPDIDPLTSAAADFFQQLGAVYETCKLGTHSPQNLGNQMEIDSGKSPSSGFVLLDCPQSMKIESNNASLVGSISDYFLSLSNGWDLTSYLKSLSKALKTMKLGPCSSTQQKEGNSGPCTVIYVVCPFPEPLAILQTVIESSASLGSVAISSDRERALLHSQVGKALSCPAAVDETSISNVLAISGFSIPKLVLQILTVDEIFRVTSPAINELVLLKETAFTVYNKARRISRGSSGDVVHSSSLSSRSHSVMNQMASIPGMWKDCVGSRMTGPSLSREGEIDASLRPGTWDNSWQATRSGGLNCDPNRNGDFLIQDEIRFMFEPLFVLAEPGSLDHGVSSTFNGNSTSDDSTGGFMMSGSTAGSADTGSSSQLDRSEQDGFGSGHHKSVPSLHCCYGWTEDWRWLVCIWTDARGELLDSHIFPFGGISSRQDTKGLQCLFVQILQQGCQILQTCCSPDSGVAKPRDFVITRIGSFYELEYLEWQKAIYSVGGSEMKQWPLQLRRSVPDGMPSSTNGASLQQQQEISLIQERALPSSPSPLYSPHSKASGFMKGGLGQPVGRKQLIGGHTMVDNSRGLLQWVQSISFVAISIDHSLHLVHQADSPSSGGTQGGNGVGPSGYLEGFTPVKSLGATPASYILIPSPSMRFLPPAPLQLPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKSVPSMRKDHKNKLKDEWPSVLSVNLIDYYGGNNISQDKVTRVIIKQGGRTASSEPKDFEVETHLILESIASELHALSWMTASPAYLNRRTALPFHCDMVLRLRRLLHFADRELSQQADNPQS